BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007G12LP1|AL425767
(784 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig562 862 0.0
3x_Contig1112 624 e-179
>3x_Contig562
Length = 1910
Score = 862 bits (435), Expect = 0.0
Identities = 438/439 (99%)
Strand = Plus / Plus
Query: 343 ttaaagaaagtagaaaagtctcagcaaacacataagaacccagaacttcgtgcctcaggg 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttaaagaaagtagaaaagtctcagcaaacacataagaacccagaacttcgtgcctcaggg 61
Query: 403 aaggtttctgacaaagctgttcctccacctaaaccaaagaaaccatctactctgaagact 462
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 62 aaggtttctgacaaagctgttcctccacttaaaccaaagaaaccatctactctgaagact 121
Query: 463 aagaagcctccaagaaaggaattgatcggtaataaatggtttattgaaaattatgaagat 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aagaagcctccaagaaaggaattgatcggtaataaatggtttattgaaaattatgaagat 181
Query: 523 gaagccgaaccgttagtgatcgaaactaaaattgacgaatctgttttcatcggtaaatgt 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gaagccgaaccgttagtgatcgaaactaaaattgacgaatctgttttcatcggtaaatgt 241
Query: 583 gtcaacacattggtacaaatcaaaggtaaggtcaacgcagttactgtcaatgaaacagaa 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gtcaacacattggtacaaatcaaaggtaaggtcaacgcagttactgtcaatgaaacagaa 301
Query: 643 aaatgcagtttagtgctagattcttccatcagtggtgtggatattattaaatgtttgaga 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aaatgcagtttagtgctagattcttccatcagtggtgtggatattattaaatgtttgaga 361
Query: 703 tttggtattcaagtggaaaacaccctgccacaaatcaccatcgacgcgtctgatagcggc 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tttggtattcaagtggaaaacaccctgccacaaatcaccatcgacgcgtctgatagcggc 421
Query: 763 tccatttatttgagtaaaa 781
|||||||||||||||||||
Sbjct: 422 tccatttatttgagtaaaa 440
>3x_Contig1112
Length = 3953
Score = 624 bits (315), Expect = e-179
Identities = 318/319 (99%)
Strand = Plus / Plus
Query: 1 gatcctaaatccgttgaatgggtccaacaatttttgtccgttttcgatagcttgaagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3622 gatcctaaatccgttgaatgggtccaacaatttttgtccgttttcgatagcttgaagctg 3681
Query: 61 tacgtaaaggaataccataccacaggtgtgacttggaacgacactactggtgaggatttc 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3682 tacgttaaggaataccataccacaggtgtgacttggaacgacactactggtgaggatttc 3741
Query: 121 gaaaccgtatacgaaagagtttccaacgagggatccggagcttcttcttctggtgctact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3742 gaaaccgtatacgaaagagtttccaacgagggatccggagcttcttcttctggtgctact 3801
Query: 181 tccagtgagccgcatagttcaggcgccggagctcctccacctccacctccacctcctccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3802 tccagtgagccgcatagttcaggcgccggagctcctccacctccacctccacctcctccg 3861
Query: 241 gcttccgtattcgaagtcaatgaacaatcaaaagaacaagaatctggtggaatcggtgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3862 gcttccgtattcgaagtcaatgaacaatcaaaagaacaagaatctggtggaatcggtgct 3921
Query: 301 gtgtttgctgagttaaacc 319
|||||||||||||||||||
Sbjct: 3922 gtgtttgctgagttaaacc 3940
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6797
Number of Sequences: 1807
Number of extensions: 6797
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 2
length of query: 784
length of database: 10,358,551
effective HSP length: 16
effective length of query: 768
effective length of database: 10,329,639
effective search space: 7933162752
effective search space used: 7933162752
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)